• Andreas Handel and Pejman Rohani (2015) “Crossing the scale from within-host infection dynamics to between-host transmission fitness: a discussion of current assumptions and knowledge” Phil. Trans. R. Soc. B 370: 20140302.

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  • Andreas Handel, Victoria Akin, Sergei S. Pilyugin, Veronika Zarnitsyna and Rustom Antia (2014) “How sticky should a virus be? The impact of virus binding and release on transmission fitness using influenza as an example”, Journal of the Royal Society Interface.

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  • Andreas Handel, Camille Lebarbenchon, David Stallknecht, Pejman Rohani (2014) “Trade-offs between and within scales: environmental persistence and withinhost fitness of avian influenza viruses”, Proceedings of the Royal Society B 281: 20133051.

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  • Andreas Handel, Justin Brown, David Stallknecht, Pejman Rohani (2013) “A Multi-scale Analysis of Influenza A Virus Fitness Trade-offs due to Temperature-dependent Virus Persistence”, PLoS Computational Biology 9(3): e1002989

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  • Andreas Handel and Matthew R. Bennett (2008) “Surviving the bottleneck: Transmission mutants and the evolution of microbial populations”, Genetics 180 (4), 2193-2200

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  • Andreas Handel, Ira M. Longini Jr., Rustom Antia (2007) “Neuraminidase Inhibitor Resistance in Influenza: Assessing the Danger of its Generation and Spread”, PLoS Computational Biology 3 (12): e240

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