• Marc Lipsitch, Wendy Barclay, Rahul Raman, Charles J Russell, Jessica A Belser, Sarah Cobey, Peter M Kasson, James O Lloyd-Smith, Sebastian Maurer-Stroh, Steven Riley, Catherine AA Beauchemin, Trevor Bedford, Thomas C Friedrich, Andreas Handel, Sander Herfst, Pablo R Murcia, Benjamin Roche, Claus O Wilke, Colin A Russell (2016). Viral factors in influenza pandemic risk assessment. eLife 5:e18491.

    Full Text


  • Veronika I Zarnitsyna, Andreas Handel, Sean R McMaster, Sarah L Hayward, Jacob E Kohlmeier, Rustom Antia (2016). Mathematical Model Reveals the Role of Memory CD8 T Cell Populations in Recall Responses to Influenza. Frontiers in immunology 7:165.

    Full Text


  • Kasia A. Pawelek, Daniel Dor Jr., Cristian Salmeron, Andreas Handel (2016) “Within-Host Models of High and Low Pathogenic Influenza Virus Infections: The Role of Macrophages”, PLoS One.

    Full Text


  • Kylie M. Quinn, Sophie G. Zaloumis, Tania Cukalac, Wan-Ting Kan, Xavier Y. X. Sng, Michiko Mirams, Katherine A. Watson, James M. McCaw, Peter C. Doherty, Paul G. Thomas, Andreas Handel, and Nicole L. La Gruta (2016) “Heightened self-reactivity associated with selective survival, but not expansion, of naïve virus-specific CD8+ T cells in aged mice”, Proc Nat Acad Sci 113:5.

    Full Text


  • Nicola L Bird, Matthew R Olson, Aeron C Hurt, Christine M Oshansky, Ding Yuan Oh, Patrick C Reading, Brendon Y Chua, Yilun Sun, Li Tang, Andreas Handel, David C Jackson, Stephen J Turner, Paul G Thomas, Katherine Kedzierska (2015) “Oseltamivir Prophylaxis Reduces Inflammation and Facilitates Establishment of Cross-Strain Protective T Cell Memory to Influenza Viruses”, PLoS One e0129768.

    Full Text


  • Andreas Handel and Mark Ebell (2015) “Neuraminidase inhibitors for influenza: fully evaluating benefits and harms”, Lancet Respiratory Medicine, Vol 3, March 2015 (correspondence).

    Full Text


  • Andreas Handel, Victoria Akin, Sergei S. Pilyugin, Veronika Zarnitsyna and Rustom Antia (2014) “How sticky should a virus be? The impact of virus binding and release on transmission fitness using influenza as an example”, Journal of the Royal Society Interface.

    Full Text


  • Andreas Handel, Camille Lebarbenchon, David Stallknecht, Pejman Rohani (2014) “Trade-offs between and within scales: environmental persistence and withinhost fitness of avian influenza viruses”, Proceedings of the Royal Society B 281: 20133051.

    Full Text
    Corrections


  • Yan Li, Andreas Handel (2014) “Modeling inoculum dose dependent patterns of acute virus infections”, Journal of Theoretical Biology

    Full Text


  • Tania Cukalac, Jesseka Chadderton, Andreas Handel, Peter Doherty, Stephen Turner, Paul Thomas,Nicole La Gruta (2014) “Reproducible selection of high avidity CD8+ T-cell clones following secondary acute virus infection”, Proceedings of the National Academy of Sciences

    Full Text


  • Andreas Handel, Justin Brown, David Stallknecht, Pejman Rohani (2013) “A Multi-scale Analysis of Influenza A Virus Fitness Trade-offs due to Temperature-dependent Virus Persistence”, PLoS Computational Biology 9(3): e1002989

    Full Text


  • Paul Thomas, Andreas Handel, Peter Doherty, Nicole La Gruta (2013) “Ecological analysis of antigen-specific CTL repertoires defines the relationship between naïve and immune T-cell populations”, Proceedings of the National Academy of Sciences 110 (5) 1839-1844

    Full Text


  • Isaac Fung, Rustom Antia, Andreas Handel (2012) “How to Minimize the Attack Rate during Multiple Influenza Outbreaks in a Heterogeneous Population”, PLoS ONE 7(6): e36573

    Full Text


  • Catherine AA Beauchemin and Andreas Handel (2011) “A review of mathematical models of influenza A infections within a host or cell culture: lessons learned and challenges ahead”, BMC Public Health 11 (Suppl 1):S7

    Full Text


  • Jessica Moffat, Andreas Handel, Peter Doherty, Stephen Turner, Paul Thomas, Nicole La Gruta (2010) “Influenza Epitope-Specific CD8+ T Cell Avidity, but Not Cytokine Polyfunctionality, Can Be Determined by TCRb Clonotype”, Journal of Immunology 185, 6850-6856

    Full Text


  • Andreas Handel, Ira M. Longini Jr., Rustom Antia (2010) “Towards a quantitative understanding of the within-host dynamics of influenza A infections”, Journal of the Royal Society Interface 7, 35-47

    Full Text


  • Andreas Handel, Ira M. Longini Jr., Rustom Antia (2009) “Intervention strategies for an influenza pandemic taking into account secondary bacterial infections”, Epidemics 1, 185-195

    Full Text


  • Andreas Handel, Ira M. Longini Jr., Rustom Antia (2009) ” Antiviral resistance and the control of pandemic influenza: The roles of stochasticity, evolution and model details”, Journal of Theoretical Biology 256 (1), 117-125

    Full Text


  • Andreas Handel and Rustom Antia (2008) “A Simple Mathematical Model Helps To Explain the Immunodominance of CD8 T Cells in Influenza A Virus Infections”, Journal of Virology 82 (16), 7768-7772

    Full Text


  • Andreas Handel, Ira M. Longini Jr., Rustom Antia (2007) “Neuraminidase Inhibitor Resistance in Influenza: Assessing the Danger of its Generation and Spread”, PLoS Computational Biology 3 (12): e240

    Full Text


  • Andreas Handel, Ira M. Longini Jr., Rustom Antia (2007) “What is the best control strategy for multiple infectious disease outbreaks?”, Proceedings of the Royal Society B 274, 833-837

    Full Text


  • Cecile Viboud, Theresa Tam, Douglas Fleming, Andreas Handel, Mark A. Miller, Lone Simonsen (2006) “Transmissibility and mortality impact of epidemic and pandemic influenza, with emphasis on the unusually deadly 1951 epidemic”, Vaccine 24, 6701

    Full Text